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The plasticity of some coral-associated microbial communities under stressors like warming and ocean acidification suggests the microbiome has a role in the acclimatization of corals to future ocean conditions. Here, we evaluated the acclimatization potential of coral-associated microbial communities of four Hawaiian coral species (Porites compressa,Porites lobata,Montipora capitata, andPocillopora acuta) over 22-month mesocosm experiment. The corals were exposed to one of four treatments: control, ocean acidification, ocean warming, or combined future ocean conditions. Over the 22-month study, 33–67% of corals died or experienced a loss of most live tissue coverage in the ocean warming and future ocean treatments while only 0–10% died in the ocean acidification and control. Among the survivors, coral-associated microbial communities responded to the chronic future ocean treatment in one of two ways: (1) microbial communities differed between the control and future ocean treatment, suggesting the potential capacity for acclimatization, or (2) microbial communities did not significantly differ between the control and future ocean treatment. The first strategy was observed in bothPoritesspecies and was associated with higher survivorship compared toM.capitataandP.acutawhich exhibited the second strategy. Interestingly, the microbial community responses to chronic stressors were independent of coral physiology. These findings indicate acclimatization of microbial communities may confer resilience in some species of corals to chronic warming associated with climate change. However,M.capitatagenets that survived the future ocean treatment hosted significantly different microbial communities from those that died, suggesting the microbial communities of the survivors conferred some resilience. Thus, even among coral species with inflexible microbial communities, some individuals may already be tolerant to future ocean conditions. These findings suggest that coral-associated microbial communities could play an important role in the persistence of some corals and underlie climate change-driven shifts in coral community composition. 

Abstract The iconic and threatened Caribbean coral,Acropora palmata, is an essential reef-ecosystem engineer. Understanding the processes underpinning this coral’s survival and growth is essential to restoring this foundational species. Here, we compared replicateA. palmatacolonies transplanted along 350 km of Florida’s offshore coral reef to determine holobiont and/or environmental variables that predict transplant success. We found a west-to-east gradient in coral physiology coupled with site-specific coral-associated microbiomes. Interestingly, no variables were linked to coral genet. Our results suggest that the unique oceanographic conditions with periodic upwelling events in the Dry Tortugas provide corals with greater opportunity for heterotrophy that in turn enhances coral growth and survivorship, and positively influences the microbiome. Our findings indicate that restoration efforts in the Dry Tortugas, and other places exhibiting higher food availability, could be most effective forA. palmata. 

Coral reefs are among the most diverse and complex ecosystems in the world that provide important ecological and economical services. Increases in sea surface temperature linked to global climate change threatens these ecosystems by inducing coral bleaching. However, it is not fully known if natural intra- or inter-annual physiological variability is linked to bleaching resilience or recovery capacity of corals. Here, we monitored the coral physiology of three common Caribbean species ( Porites divaricata, Porites astreoides, Orbicella faveolata ) at six time points over 2 years by measuring the following traits: calcification, biomass, lipids, proteins, carbohydrates, chlorophyll a , algal endosymbiont density, stable carbon isotopes of the host and endosymbiotic algae, and the stable carbon and oxygen isotopes of the skeleton. The overall physiological profile of all three species varied over time and that of P. divaricata was consistently different from the two other coral species. Porites divaricata had higher energy reserves coupled with higher contributions of heterotrophically derived carbon to host tissues than both P. astreoides and O. faveolata . Consistently higher overall energy reserves and heterotrophic contributions to tissues appear to buffer against environmental stress, including bleaching events. Thus, natural physiological variability among coral species appears to be a stronger predictor of coral bleaching resilience than intra- or inter-annual physiological variability within a coral species. 

Evidence has shown that individually feeding or reduced light can mitigate the negative effects of elevated temperature on coral physiology. We aimed to evaluate if simultaneous low light and feeding would mitigate, minimize, or exacerbate negative effects of elevated temperature on coral physiology and carbon budgets. Pocillopora damicornis, Stylophora pistillata, and Turbinaria reniformis were grown for 28 days under a fully factorial experiment including two seawater temperatures (ambient temperature of 25 °C, elevated temperature of 30 °C), two light levels (high light of 300 μmol photons m−2 s−1, low light of 150 μmol photons m−2 s−1), and either fed (Artemia nauplii) or unfed. Coral physiology was significantly affected by temperature in all species, but the way in which low light and feeding altered their physiological responses was species-specific. All three species photo-acclimated to low light by increasing chlorophyll a. Pocillopora damicornis required feeding to meet metabolic demand irrespective of temperature but was unable to maintain calcification under low light when fed. In T. reniformis, low light mitigated the negative effect of elevated temperature on total lipids, while feeding mitigated the negative effects of elevated temperature on metabolic demand. In S. pistillata, low light compounded the negative effects of elevated temperature on metabolic demand, while feeding minimized this negative effect but was not sufficient to provide 100% metabolic demand. Overall, low light and feeding did not act synergistically, nor additively, to mitigate the negative effects of elevated temperature on P. damicornis, S. pistillata, or T. reniformis. However, feeding alone was critical to the maintenance of metabolic demand at elevated temperature, suggesting that sufficient supply of heterotrophic food sources is likely essential for corals during thermal stress (bleaching) events. 

Under current climate warming predictions, the future of coral reefs is dire. With projected coral reef decline, it is likely that coral specimens for bleaching research will increasingly become a more limited resource in the future. By adopting a holistic approach through increased collaborations, coral bleaching scientists can maximize a specimen’s investigative yield, thus reducing the need to remove more coral material from the reef. Yet to expand a specimen’s utility for additional analytic methods, information on how corals are collected is essential as many methods are variably sensitive to upstream handling and processing. In an effort to identify common practices for coral collection, sacrifice, preservation, and processing in coral bleaching research, we surveyed the literature from the last 6.5 years and created and analyzed the resulting dataset of 171 publications. Since January 2014, at least 21,890 coral specimens were collected for bleaching surveys or bleaching experiments. These specimens spanned 122 species of scleractinian corals where the most frequently sampled were Acropora millepora , Pocillopora damicornis , and Stylophora pistillata . Almost 90% of studies removed fragments from the reef, 6% collected skeletal cores, and 3% collected mucus specimens. The most common methods for sacrificing specimens were snap freezing with liquid nitrogen, chemical preservation (e.g., with ethanol or nucleic acid stabilizing buffer), or airbrushing live fragments. We also characterized 37 distinct methodological pathways from collection to processing of specimens in preparation for a variety of physiological, -omic, microscopy, and imaging analyses. Interestingly, almost half of all studies used only one of six different pathways. These similarities in collection, preservation, and processing methods illustrate that archived coral specimens could be readily shared among researchers for additional analyses. In addition, our review provides a reference for future researchers who are considering which methodological pathway to select to maximize the utility of coral bleaching specimens that they collect. 

Abstract For over three decades, scientists have conducted heat-stress experiments to predict how coral will respond to ocean warming due to global climate change. However, there are often conflicting results in the literature that are difficult to resolve, which we hypothesize are a result of unintended biases, variation in experimental design, and underreporting of critical methodological information. Here, we reviewed 255 coral heat-stress experiments to (1) document where and when they were conducted and on which species, (2) assess variability in experimental design, and (3) quantify the diversity of response variables measured. First, we found that two-thirds of studies were conducted in only three countries, three coral species were more heavily studied than others, and only 4% of studies focused on earlier life stages. Second, slightly more than half of all heat-stress exposures were less than 8 d in duration, only 17% of experiments fed corals, and experimental conditions varied widely, including the level and rate of temperature increase, light intensity, number of genets used, and the length of acclimation period. In addition, 95%, 55%, and > 35% of studies did not report tank flow conditions, light–dark cycle used, or the date of the experiment, respectively. Finally, we found that 21% of experiments did not measure any bleaching phenotype traits, 77% did not identify the Symbiodiniaceae endosymbiont, and the contribution of the coral host in the physiological response to heat-stress was often not investigated. This review highlights geographic, taxonomic, and heat-stress duration biases in our understanding of coral bleaching, and large variability in the reporting and design of heat-stress experiments that could account for some of the discrepancies in the literature. Development of some best practice recommendations for coral bleaching experiments could improve cross-studies comparisons and increase the efficiency of coral bleaching research at a time when it is needed most.